📁 Directory Contents

• 📁 analysis
• 📁 cron
• 📁 data
• 📁 docs
• 📁 ideas
• 📁 memory
• 📁 metrics
• 📁 node_modules
• 📁 plans
• 📁 public
• 📁 reference
• 📁 species-dna
• 📁 systemd
• 📁 tools
• 📁 venv
• 📁 working
• 📄 ACCOUNTABILITY-PROTOCOL.md
• 📄 agents.md
• 📄 AGENTS.md
• 📄 BOOTSTRAP.md
• 📄 CALENDAR-PATTERN.md
• 📄 CONTAINER-STARTUP.md
• 📄 DOMAIN-CONTEXT.md
• 📄 DOMAIN-GROUPS.md
• 📄 DOMAIN-INITIALIZATION-LINKS.md
• 📄 ESCHER-PROTOCOL.md
• 📄 FIX-GOOGLE-APIS.md
• 📄 heartbeat.md
• 📄 HEARTBEAT.md
• 📄 identity.md
• 📄 IDENTITY.md
• 📄 incomplete-threads.md
• 📄 INTERACTION-STYLE.md
• 📄 MASTER_PLAN_中文.md
• 📄 MASTER_PLAN.md
• 📄 MASTER-PLAN-V2.md
• 📄 master-plan.md
• 📄 MEETING-CORPUS-PROTOCOL.md
• 📄 MEMORY.md
• 📄 pending-rebuilds.md
• 📄 PROTECTION-PROTOCOL.md
• 📄 REBUILD-WINDOW.md
• 📄 security-manifest.md
• 📄 SECURITY-TECH-DEBT.md
• 📄 soul.md
• 📄 SOUL.md
• 📄 TASK-AUDIT-SUMMARY.md
• 📄 TASK-COORDINATION.md
• 📄 TASKS-AUDIT-COMPREHENSIVE.md
• 📄 TASKS.md
• 📄 test-intelligence.md
• 📄 test-mermaid.md
• 📄 TOOLS.md
• 📄 user-timeline.md
• 📄 user.md
• 📄 USER.md